NAPP NAPP

Escherichia_coli_536    Total Clusters: 6

Phylogenetic profiles of RNA-rich cluster

Each column represents the average phylogenetic profile of all members of an RNA-rich cluster. White squares indicate that members of this cluster do not have homologues in this species. Shaded squares indicate that members of this cluster have homologues in this species (darker: homologues with higher Blast scores, lighter: homologues with lower Blast scores). Move cursor across columns for information about Gene Ontology term biases in the coding sequences (CDS) and contents of the corresponding clusters. Click on column or column number to visualize cluster contents (and use "back" button to come back here). Click on species name to jump to the NAPP page for this species.

Color code
No homologLegendeHomolog with high blast score

0%
123456
                  Lactobacillus_rhamnosus_Lc_705
                  Lactobacillus_rhamnosus_GG
                  Lactobacillus_casei_ATCC_334
                  Lactobacillus_casei
                  Lactobacillus_sakei_23K
                  Lactobacillus_plantarum
                  Dehalococcoides_GT_uid42115
                  Lactobacillus_plantarum_JDM1
                  Lactobacillus_brevis_ATCC_367
                  Pediococcus_pentosaceus_ATCC_25745
                  Lactobacillus_salivarius_UCC118
                  Bacillus_pseudofirmus_OF4_uid45847
                  Bacillus_halodurans
                  Bacillus_clausii_KSM-K16
                  Bacillus_subtilis
                  Bacillus_amyloliquefaciens_FZB42
                  Bacillus_licheniformis_ATCC_14580
                  Bacillus_licheniformis_DSM_13
                  Bacillus_pumilus_SAFR-032
                  Bacillus_cereus_03BB102
                  Bacillus_cereus_AH820
                  Bacillus_thuringiensis_konkukian
                  Bacillus_cereus_ZK
                  Bacillus_anthracis_Ames_0581
                  Bacillus_cereus_Q1
                  Bacillus_anthracis_Ames
                  Bacillus_anthracis_str_Sterne
                  Bacillus_anthracis_CDC_684
                  Bacillus_cereus_ATCC_10987
                  Bacillus_thuringiensis_Al_Hakam
                  Bacillus_cereus_B4264
                  Bacillus_cereus_G9842
                  Bacillus_cereus_ATCC14579
                  Bacillus_anthracis_A0248
                  Bacillus_cereus_AH187
                  Bacillus_weihenstephanensis_KBAB4
                  Bacillus_cereus_cytotoxis_NVH_391-98
                  Lysinibacillus_sphaericus_C3_41
                  Staphylococcus_aureus_Newman
                  Staphylococcus_aureus_MW2
                  Staphylococcus_aureus_USA300_FPR3757
                  Staphylococcus_aureus_COL
                  Staphylococcus_aureus_Mu50
                  Staphylococcus_aureus_ED98
                  Staphylococcus_aureus_N315
                  Staphylococcus_aureus_aureus_MRSA252
                  Staphylococcus_aureus_RF122
                  Staphylococcus_aureus_USA300_TCH1516
                  Staphylococcus_aureus_aureus_MSSA476
                  Staphylococcus_aureus_JH9
                  Staphylococcus_aureus_JH1
                  Staphylococcus_aureus_NCTC_8325
                  Staphylococcus_aureus_Mu3
                  Staphylococcus_epidermidis_RP62A
                  Staphylococcus_epidermidis_ATCC_12228
                  Staphylococcus_lugdunensis_HKU09_01_uid46233
                  Staphylococcus_haemolyticus
                  Staphylococcus_saprophyticus
                  Staphylococcus_carnosus_TM300
                  Macrococcus_caseolyticus_JCSC5402
                  Geobacillus_Y412MC61
                  Geobacillus_kaustophilus_HTA426
                  Geobacillus_thermodenitrificans_NG80-2
                  Geobacillus_WCH70
                  Anoxybacillus_flavithermus_WK1
                  Oceanobacillus_iheyensis
                  Listeria_monocytogenes_08_5923_uid43727
                  Listeria_monocytogenes_Clip81459
                  Listeria_monocytogenes_4b_F2365
                  Listeria_monocytogenes_uid43671
                  Listeria_monocytogenes
                  Listeria_monocytogenes_HCC23
                  Listeria_innocua
                  Listeria_welshimeri_serovar_6b_SLCC5334
                  Listeria_seeligeri_serovar_1_2b_SLCC3954_uid46215
                  Enterococcus_faecalis_V583
                  Lactobacillus_reuteri_F275_Kitasato
                  Lactobacillus_reuteri_DSM_20016
                  Lactobacillus_fermentum_IFO_3956
                  Exiguobacterium_sibiricum_255_15
                  Exiguobacterium_AT1b
                  Geobacillus_Y412MC10
                  Paenibacillus_JDR_2
                  Lactobacillus_helveticus_DPC_4571
                  Lactobacillus_acidophilus_NCFM
                  Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
                  Lactobacillus_delbrueckii_bulgaricus
                  Lactobacillus_johnsonii_FI9785
                  Lactobacillus_johnsonii_NCC_533
                  Lactobacillus_gasseri_ATCC_33323
                  Brevibacillus_brevis_NBRC_100599
                  Streptococcus_pyogenes_Manfredo
                  Streptococcus_pyogenes_SSI-1
                  Streptococcus_pyogenes_MGAS5005
                  Streptococcus_pyogenes_MGAS315
                  Streptococcus_pyogenes_MGAS2096
                  Streptococcus_pyogenes_MGAS6180
                  Streptococcus_pyogenes_MGAS9429
                  Streptococcus_pyogenes_MGAS10270
                  Streptococcus_pyogenes_M1_GAS
                  Streptococcus_pyogenes_NZ131
                  Streptococcus_pyogenes_MGAS10750
                  Streptococcus_pyogenes_MGAS8232
                  Streptococcus_pyogenes_MGAS10394
                  Streptococcus_uberis_0140J
                  Streptococcus_dysgalactiae_equisimilis_GGS_124
                  Streptococcus_gallolyticus_UCN34_uid46061
                  Streptococcus_agalactiae_NEM316
                  Streptococcus_agalactiae_2603
                  Streptococcus_agalactiae_A909
                  Streptococcus_equi_zooepidemicus
                  Streptococcus_equi_4047
                  Streptococcus_equi_zooepidemicus_MGCS10565
                  Streptococcus_suis_SC84
                  Streptococcus_suis_05ZYH33
                  Streptococcus_suis_BM407
                  Streptococcus_suis_98HAH33
                  Streptococcus_suis_P1_7
                  Streptococcus_thermophilus_LMG_18311
                  Streptococcus_thermophilus_LMD-9
                  Streptococcus_thermophilus_CNRZ1066
                  Streptococcus_pneumoniae_ATCC_700669
                  Streptococcus_pneumoniae_JJA
                  Streptococcus_pneumoniae_70585
                  Streptococcus_pneumoniae_G54
                  Streptococcus_pneumoniae_Taiwan19F_14
                  Streptococcus_pneumoniae_D39
                  Streptococcus_pneumoniae_R6
                  Streptococcus_pneumoniae_TIGR4
                  Streptococcus_pneumoniae_Hungary19A_6
                  Streptococcus_pneumoniae_CGSP14
                  Streptococcus_pneumoniae_P1031
                  Streptococcus_mitis_B6_uid46097
                  Streptococcus_sanguinis_SK36
                  Streptococcus_gordonii_Challis_substr_CH1
                  Streptococcus_mutans
                  Streptococcus_mutans_NN2025_uid46353
                  Lactococcus_lactis_KF147
                  Lactococcus_lactis
                  Lactococcus_lactis_cremoris_SK11
                  Lactococcus_lactis_cremoris_MG1363
                  Leuconostoc_mesenteroides_ATCC_8293
                  Leuconostoc_citreum_KM20
                  Alicyclobacillus_acidocaldarius_DSM_446
                  Oenococcus_oeni_PSU-1
                  Thermoanaerobacter_X514
                  Thermoanaerobacter_pseudethanolicus_ATCC_33223
                  Thermoanaerobacter_italicus_Ab9_uid46241
                  Thermoanaerobacter_tengcongensis
                  Ammonifex_degensii_KC4
                  Moorella_thermoacetica_ATCC_39073
                  Pelotomaculum_thermopropionicum_SI
                  Natranaerobius_thermophilus_JW_NM_WN_LF
                  Candidatus_Desulforudis_audaxviator_MP104C
                  Carboxydothermus_hydrogenoformans_Z-2901
                  Desulfotomaculum_acetoxidans_DSM_771
                  Desulfotomaculum_reducens_MI-1
                  Heliobacterium_modesticaldum_Ice1
                  Desulfitobacterium_hafniense_Y51
                  Desulfitobacterium_hafniense_DCB_2
                  Anaerocellum_thermophilum_DSM_6725
                  Caldicellulosiruptor_saccharolyticus_DSM_8903
                  Clostridium_thermocellum_ATCC_27405
                  Clostridium_cellulolyticum_H10
                  Clostridiales_genomosp__BVAB3_UPII9_5_uid46219
                  Syntrophomonas_wolfei_Goettingen
                  Dictyoglomus_thermophilum_H_6_12
                  Dictyoglomus_turgidum_DSM_6724
                  Symbiobacterium_thermophilum_IAM14863
                  Alkaliphilus_oremlandii_OhILAs
                  Alkaliphilus_metalliredigens_QYMF
                  Clostridium_difficile_BI9_uid46871
                  Clostridium_difficile_630
                  Clostridium_difficile_CD196
                  Clostridium_difficile_R20291
                  Clostridium_botulinum_E3_Alaska_E43
                  Clostridium_botulinum_B_Eklund_17B
                  Clostridium_beijerinckii_NCIMB_8052
                  Clostridium_perfringens
                  Clostridium_perfringens_ATCC_13124
                  Clostridium_perfringens_SM101_uid12521
                  Clostridium_novyi_NT
                  Clostridium_botulinum_A_ATCC_19397
                  Clostridium_botulinum_A_Hall
                  Clostridium_botulinum_A
                  Clostridium_botulinum_Ba4_657
                  Clostridium_botulinum_F_Langeland
                  Clostridium_botulinum_B1_Okra
                  Clostridium_botulinum_A2_Kyoto
                  Clostridium_botulinum_A3_Loch_Maree
                  Clostridium_tetani_E88
                  Clostridium_acetobutylicum
                  Clostridium_kluyveri_DSM_555
                  Clostridium_kluyveri_NBRC_12016
                  Eubacterium_rectale_ATCC_33656
                  Eubacterium_eligens_ATCC_27750
                  Clostridium_phytofermentans_ISDg
                  Acidaminococcus_fermentans_DSM_20731_uid43471
                  Veillonella_parvula_DSM_2008
                  Mycoplasma_capricolum_ATCC_27343
                  Mycoplasma_mycoides
                  Mesoplasma_florum_L1
                  Thermanaerovibrio_acidaminovorans_DSM_6589
                  Saccharomonospora_viridis_DSM_43017
                  Saccharopolyspora_erythraea_NRRL_2338
                  Rhodococcus_opacus_B4_uid36573
                  Rhodococcus_jostii_RHA1
                  Rhodococcus_erythropolis_PR4
                  Nocardia_farcinica_IFM10152
                  Gordonia_bronchialis_DSM_43247
                  Actinosynnema_mirum_DSM_43827
                  Mycobacterium_gilvum_PYR-GCK
                  Mycobacterium_smegmatis_MC2_155
                  Mycobacterium_MCS
                  Mycobacterium_KMS
                  Mycobacterium_JLS
                  Mycobacterium_vanbaalenii_PYR-1
                  Mycobacterium_abscessus_ATCC_19977
                  Mycobacterium_ulcerans_Agy99
                  Mycobacterium_marinum_M
                  Mycobacterium_bovis
                  Mycobacterium_tuberculosis_H37Rv
                  Mycobacterium_tuberculosis_H37Ra
                  Mycobacterium_tuberculosis_CDC1551
                  Mycobacterium_tuberculosis_KZN_1435
                  Mycobacterium_bovis_BCG_Pasteur_1173P2
                  Mycobacterium_bovis_BCG_Tokyo_172
                  Mycobacterium_tuberculosis_F11
                  Mycobacterium_avium_104
                  Mycobacterium_avium_paratuberculosis
                  Mycobacterium_leprae
                  Mycobacterium_leprae_Br4923
                  Corynebacterium_jeikeium_K411
                  Corynebacterium_urealyticum_DSM_7109
                  Corynebacterium_aurimucosum_ATCC_700975
                  Corynebacterium_diphtheriae
                  Corynebacterium_glutamicum_ATCC_13032_Bielefeld
                  Corynebacterium_glutamicum_ATCC_13032_Kitasato
                  Corynebacterium_glutamicum_R
                  Corynebacterium_efficiens_YS-314
                  Corynebacterium_kroppenstedtii_DSM_44385
                  Frankia_CcI3
                  Frankia_alni_ACN14a
                  Frankia_EAN1pec
                  Acidothermus_cellulolyticus_11B
                  Geodermatophilus_obscurus_DSM_43160_uid43725
                  Salinispora_tropica_CNB-440
                  Salinispora_arenicola_CNS-205
                  Nakamurella_multipartita_DSM_44233
                  Streptosporangium_roseum_DSM_43021
                  Thermomonospora_curvata_DSM_43183
                  Thermobifida_fusca_YX
                  Catenulispora_acidiphila_DSM_44928
                  Kribbella_flavida_DSM_17836_uid43465
                  Nocardioides_JS614
                  Arthrobacter_chlorophenolicus_A6
                  Arthrobacter_FB24
                  Arthrobacter_aurescens_TC1
                  Renibacterium_salmoninarum_ATCC_33209
                  Kocuria_rhizophila_DC2201
                  Rothia_mucilaginosa
                  Kytococcus_sedentarius_DSM_20547
                  Xylanimonas_cellulosilytica_DSM_15894
                  Beutenbergia_cavernae_DSM_12333
                  Brachybacterium_faecium_DSM_4810
                  Clavibacter_michiganensis_NCPPB_382
                  Clavibacter_michiganensis_sepedonicus
                  Leifsonia_xyli_xyli_CTCB0
                  Kineococcus_radiotolerans_SRS30216
                  Micrococcus_luteus_NCTC_2665
                  Jonesia_denitrificans_DSM_20603
                  Streptomyces_griseus_NBRC_13350
                  Streptomyces_avermitilis
                  Streptomyces_coelicolor
                  Streptomyces_scabiei_87_22_uid46531
                  Stackebrandtia_nassauensis_DSM_44728_uid46663
                  Tropheryma_whipplei_TW08_27
                  Tropheryma_whipplei_Twist
                  Propionibacterium_acnes_KPA171202
                  Acidimicrobium_ferrooxidans_DSM_10331
                  Bifidobacterium_dentium_Bd1
                  Bifidobacterium_adolescentis_ATCC_15703
                  Bifidobacterium_longum_DJO10A
                  Bifidobacterium_longum
                  Bifidobacterium_longum_infantis_ATCC_15697
                  Gardnerella_vaginalis_409_05_uid43211
                  Bifidobacterium_animalis_lactis_DSM_10140
                  Bifidobacterium_animalis_lactis_Bl_04
                  Bifidobacterium_animalis_lactis_AD011
                  Conexibacter_woesei_DSM_14684_uid43467
                  Rubrobacter_xylanophilus_DSM_9941
                  Slackia_heliotrinireducens_DSM_20476
                  Eggerthella_lenta_DSM_2243
                  Cryptobacterium_curtum_DSM_15641
                  Atopobium_parvulum_DSM_20469
                  cyanobacterium_UCYN_A_uid43697
                  Cyanothece_ATCC_51142
                  Cyanothece_PCC_8801
                  Cyanothece_PCC_8802
                  Microcystis_aeruginosa_NIES_843
                  Cyanothece_PCC_7424
                  Synechocystis_PCC6803
                  Synechococcus_PCC_7002
                  Acaryochloris_marina_MBIC11017
                  Cyanothece_PCC_7425
                  Thermosynechococcus_elongatus
                  Trichodesmium_erythraeum_IMS101
                  Anabaena_variabilis_ATCC_29413_uid46945
                  Anabaena_variabilis_ATCC_29413
                  Nostoc_sp
                  Nostoc_punctiforme_PCC_73102
                  Gloeobacter_violaceus
                  Synechococcus_WH_7803
                  Synechococcus_CC9311
                  Synechococcus_CC9605
                  Synechococcus_CC9902
                  Synechococcus_sp_WH8102
                  Prochlorococcus_marinus_MIT9313
                  Prochlorococcus_marinus_MIT_9303
                  Prochlorococcus_marinus_MIT_9211
                  Prochlorococcus_marinus_CCMP1375
                  Prochlorococcus_marinus_MIT_9301
                  Prochlorococcus_marinus_MIT_9215
                  Prochlorococcus_marinus_AS9601
                  Prochlorococcus_marinus_MIT_9312
                  Prochlorococcus_marinus_MED4
                  Prochlorococcus_marinus_MIT_9515
                  Prochlorococcus_marinus_NATL1A
                  Prochlorococcus_marinus_NATL2A
                  Synechococcus_RCC307
                  Synechococcus_elongatus_PCC_6301
                  Synechococcus_elongatus_PCC_7942
                  Cyanobacteria_bacterium_Yellowstone_B-Prime
                  Cyanobacteria_bacterium_Yellowstone_A-Prime
                  Halothermothrix_orenii_H_168
                  Finegoldia_magna_ATCC_29328
                  Anaerococcus_prevotii_DSM_20548
                  Thermosipho_melanesiensis_BI429
                  Thermosipho_africanus_TCF52B
                  Fervidobacterium_nodosum_Rt17-B1
                  Thermotoga_naphthophila_RKU_10
                  Thermotoga_petrophila_RKU-1
                  Thermotoga_maritima
                  Thermotoga_RQ2
                  Thermotoga_neapolitana_DSM_4359
                  Thermotoga_lettingae_TMO
                  Kosmotoga_olearia_TBF_19_5_1
                  Thermodesulfovibrio_yellowstonii_DSM_11347
                  Thermomicrobium_roseum_DSM_5159
                  Sphaerobacter_thermophilus_DSM_20745
                  Thermobaculum_terrenum_ATCC_BAA_798
                  Deferribacter_desulfuricans_SSM1_uid46653
                  Denitrovibrio_acetiphilus_DSM_12809_uid46657
                  Onion_yellows_phytoplasma
                  Aster_yellows_witches-broom_phytoplasma_AYWB
                  Candidatus_Phytoplasma_australiense
                  Candidatus_Phytoplasma_mali
                  Acholeplasma_laidlawii_PG_8A
                  Chloroflexus_aurantiacus_J_10_fl
                  Chloroflexus_Y_400_fl
                  Chloroflexus_aggregans_DSM_9485
                  Roseiflexus_castenholzii_DSM_13941
                  Roseiflexus_RS-1
                  Herpetosiphon_aurantiacus_ATCC_23779
                  Rhodothermus_marinus_DSM_4252
                  Salinibacter_ruber_DSM_13855
                  Gemmatimonas_aurantiaca_T_27
                  Mycoplasma_arthritidis_158L3_1
                  Mycoplasma_hominis
                  Mycoplasma_pulmonis
                  Mycoplasma_agalactiae_uid46679
                  Mycoplasma_agalactiae_PG2
                  Mycoplasma_synoviae_53
                  Mycoplasma_mobile_163K
                  Mycoplasma_hyopneumoniae_7448
                  Mycoplasma_hyopneumoniae_J
                  Mycoplasma_hyopneumoniae_232
                  Mycoplasma_conjunctivae_HRC_581_uid32285
                  Thermus_thermophilus_HB8
                  Thermus_thermophilus_HB27
                  Meiothermus_ruber_DSM_1279_uid46661
                  Deinococcus_radiodurans
                  Deinococcus_deserti_VCD115
                  Deinococcus_geothermalis_DSM_11300
                  Ureaplasma_urealyticum
                  Ureaplasma_parvum_serovar_3_ATCC_27815
                  Ureaplasma_urealyticum_serovar_10_ATCC_33699
                  Mycoplasma_penetrans
                  Mycoplasma_pneumoniae
                  Mycoplasma_genitalium
                  Mycoplasma_gallisepticum
                  Candidatus_Desulfococcus_oleovorans_Hxd3
                  Desulfatibacillum_alkenivorans_AK_01
                  Desulfobacterium_autotrophicum_HRM2
                  Syntrophus_aciditrophicus_SB
                  Pelobacter_propionicus_DSM_2379
                  Geobacter_lovleyi_SZ
                  Geobacter_FRC_32
                  Geobacter_uraniumreducens_Rf4
                  Geobacter_bemidjiensis_Bem
                  Geobacter_M21
                  Geobacter_sulfurreducens
                  Geobacter_metallireducens_GS-15
                  Pelobacter_carbinolicus
                  Anaeromyxobacter_dehalogenans_2CP_1
                  Anaeromyxobacter_K
                  Anaeromyxobacter_dehalogenans_2CP-C
                  Anaeromyxobacter_Fw109-5
                  Myxococcus_xanthus_DK_1622
                  Desulfotalea_psychrophila_LSv54
                  Sorangium_cellulosum__So_ce_56_
                  Magnetococcus_MC-1
                  Syntrophobacter_fumaroxidans_MPOB
                  Azospirillum_B510_uid46085
                  Rhodospirillum_centenum_SW
                  Magnetospirillum_magneticum_AMB-1
                  Rhodospirillum_rubrum_ATCC_11170
                  Rhizobium_etli_CFN_42
                  Rhizobium_etli_CIAT_652
                  Rhizobium_leguminosarum_bv__trifolii_WSM1325
                  Rhizobium_leguminosarum_bv__trifolii_WSM2304
                  Rhizobium_leguminosarum_bv_viciae_3841
                  Agrobacterium_radiobacter_K84
                  Sinorhizobium_medicae_WSM419
                  Sinorhizobium_meliloti
                  Rhizobium_NGR234
                  Brucella_canis_ATCC_23365
                  Brucella_suis_1330
                  Brucella_suis_ATCC_23445
                  Brucella_ovis
                  Brucella_microti_CCM_4915
                  Brucella_abortus_bv__1_9_941
                  Brucella_melitensis_ATCC_23457
                  Brucella_abortus_S19
                  Brucella_melitensis
                  Brucella_melitensis_biovar_Abortus
                  Ochrobactrum_anthropi_ATCC_49188
                  Mesorhizobium_loti
                  Mesorhizobium_BNC1
                  Bartonella_grahamii_as4aup
                  Bartonella_tribocorum_CIP_105476
                  Bartonella_henselae_Houston-1
                  Bartonella_quintana_Toulouse
                  Bartonella_bacilliformis_KC583
                  Agrobacterium_vitis_S4
                  Agrobacterium_tumefaciens_C58_Cereon
                  Azorhizobium_caulinodans_ORS_571
                  Xanthobacter_autotrophicus_Py2
                  Beijerinckia_indica_ATCC_9039
                  Methylocella_silvestris_BL2
                  Nitrobacter_winogradskyi_Nb-255
                  Nitrobacter_hamburgensis_X14
                  Oligotropha_carboxidovorans_OM5
                  Rhodopseudomonas_palustris_BisB5
                  Rhodopseudomonas_palustris_HaA2
                  Rhodopseudomonas_palustris_BisA53
                  Rhodopseudomonas_palustris_BisB18
                  Bradyrhizobium_BTAi1
                  Bradyrhizobium_ORS278
                  Bradyrhizobium_japonicum
                  Rhodopseudomonas_palustris_CGA009
                  Rhodopseudomonas_palustris_TIE_1
                  Candidatus_Liberibacter_asiaticus_psy62
                  Parvibaculum_lavamentivorans_DS-1
                  Methylobacterium_nodulans_ORS_2060
                  Methylobacterium_4_46
                  Methylobacterium_extorquens_DM4
                  Methylobacterium_extorquens_AM1
                  Methylobacterium_extorquens_PA1
                  Methylobacterium_chloromethanicum_CM4
                  Methylobacterium_populi_BJ001
                  Methylobacterium_radiotolerans_JCM_2831
                  Maricaulis_maris_MCS10
                  Hirschia_baltica_ATCC_49814
                  Hyphomonas_neptunium_ATCC_15444
                  Caulobacter_crescentus
                  Caulobacter_crescentus_NA1000
                  Caulobacter_K31
                  Phenylobacterium_zucineum_HLK1
                  Silicibacter_TM1040
                  Ruegeria_pomeroyi_DSS_3
                  Roseobacter_denitrificans_OCh_114
                  Dinoroseobacter_shibae_DFL_12
                  Rhodobacter_sphaeroides_KD131
                  Rhodobacter_sphaeroides_ATCC_17029
                  Rhodobacter_sphaeroides_2_4_1
                  Rhodobacter_sphaeroides_ATCC_17025
                  Paracoccus_denitrificans_PD1222
                  Jannaschia_CCS1
                  Sphingopyxis_alaskensis_RB2256
                  Erythrobacter_litoralis_HTCC2594
                  Novosphingobium_aromaticivorans_DSM_12444
                  Sphingomonas_wittichii_RW1
                  Zymomonas_mobilis_NCIMB_11163
                  Zymomonas_mobilis_ZM4
                  Gluconacetobacter_diazotrophicus_PAl_5_JGI
                  Gluconacetobacter_diazotrophicus_PAl_5_FAPERJ
                  Acetobacter_pasteurianus_IFO_3283_01
                  Granulobacter_bethesdensis_CGDNIH1
                  Gluconobacter_oxydans_621H
                  Acidiphilium_cryptum_JF-5
                  Rickettsia_africae_ESF_5
                  Rickettsia_conorii
                  Rickettsia_rickettsii_Iowa
                  Rickettsia_rickettsii_Sheila_Smith
                  Rickettsia_peacockii_Rustic
                  Rickettsia_massiliae_MTU5
                  Rickettsia_felis_URRWXCal2
                  Rickettsia_bellii_RML369-C
                  Rickettsia_bellii_OSU_85-389
                  Rickettsia_canadensis_McKiel
                  Rickettsia_akari_Hartford
                  Rickettsia_prowazekii
                  Rickettsia_typhi_wilmington
                  Orientia_tsutsugamushi_Ikeda
                  Orientia_tsutsugamushi_Boryong
                  Haliangium_ochraceum_DSM_14365
                  Desulfovibrio_vulgaris_Hildenborough
                  Desulfovibrio_vulgaris_DP4
                  Desulfovibrio_vulgaris__Miyazaki_F_
                  Desulfovibrio_desulfuricans_ATCC_27774
                  Desulfovibrio_desulfuricans_G20
                  Desulfovibrio_magneticus_RS_1
                  Desulfomicrobium_baculatum_DSM_4028
                  Desulfovibrio_salexigens_DSM_2638
                  Lawsonia_intracellularis_PHE_MN1-00
                  Desulfohalobium_retbaense_DSM_5692
                  Bdellovibrio_bacteriovorus
                  Candidatus_Pelagibacter_ubique_HTCC1062
                  Anaplasma_marginale_St_Maries
                  Anaplasma_marginale_Florida
                  Anaplasma_centrale_Israel
                  Anaplasma_phagocytophilum_HZ
                  Ehrlichia_chaffeensis_Arkansas
                  Ehrlichia_canis_Jake
                  Ehrlichia_ruminantium_str._Welgevonden_CIRAD
                  Ehrlichia_ruminantium_Welgevonden_UPSA
                  Ehrlichia_ruminantium_Gardel
                  Wolbachia_wRi
                  Wolbachia_endosymbiont_of_Drosophila_melanogaster
                  Wolbachia_endosymbiont_of_Brugia_malayi_TRS
                  Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel
                  Neorickettsia_risticii_Illinois
                  Neorickettsia_sennetsu_Miyayama
                  Saccharophagus_degradans_2-40
                  Teredinibacter_turnerae_T7901
                  Cellvibrio_japonicus_Ueda107
                  Pseudomonas_putida_KT2440
                  Pseudomonas_putida_F1
                  Pseudomonas_putida_GB_1
                  Pseudomonas_entomophila_L48
                  Pseudomonas_putida_W619
                  Pseudomonas_mendocina_ymp
                  Pseudomonas_fluorescens_Pf0_1
                  Pseudomonas_stutzeri_A1501
                  Pseudomonas_syringae_phaseolicola_1448A
                  Pseudomonas_syringae_pv_B728a
                  Pseudomonas_syringae_tomato_DC3000
                  Pseudomonas_fluorescens_Pf-5
                  Pseudomonas_fluorescens_SBW25
                  Pseudomonas_aeruginosa_PA7
                  Pseudomonas_aeruginosa_UCBPP-PA14
                  Pseudomonas_aeruginosa_LESB58
                  Pseudomonas_aeruginosa
                  Azotobacter_vinelandii_DJ
                  Hahella_chejuensis_KCTC_2396
                  Marinobacter_aquaeolei_VT8
                  Alcanivorax_borkumensis_SK2
                  Alkalilimnicola_ehrlichei_MLHE-1
                  Halorhodospira_halophila_SL1
                  Thioalkalivibrio_K90mix_uid46181
                  Thioalkalivibrio_HL_EbGR7
                  Allochromatium_vinosum_DSM_180_uid46083
                  Methylococcus_capsulatus_Bath
                  Nitrosococcus_halophilus_Nc4_uid46803
                  Nitrosococcus_oceani_ATCC_19707
                  Coxiella_burnetii_Dugway_7E9-12
                  Coxiella_burnetii
                  Coxiella_burnetii_CbuG_Q212
                  Coxiella_burnetii_RSA_331
                  Coxiella_burnetii_CbuK_Q154
                  Kangiella_koreensis_DSM_16069
                  Marinomonas_MWYL1
                  Chromohalobacter_salexigens_DSM_3043
                  Halothiobacillus_neapolitanus_c2
                  Legionella_pneumophila_Paris
                  Legionella_pneumophila_Corby
                  Legionella_pneumophila_Lens
                  Legionella_pneumophila_Philadelphia_1
                  Legionella_longbeachae_NSW150_uid46099
                  Psychrobacter_arcticum_273-4
                  Psychrobacter_cryohalolentis_K5
                  Psychrobacter_PRwf-1
                  Acinetobacter_baumannii_AB307_0294
                  Acinetobacter_baumannii_AYE
                  Acinetobacter_baumannii_ATCC_17978
                  Acinetobacter_baumannii_ACICU
                  Acinetobacter_baumannii_AB0057
                  Acinetobacter_baumannii_SDF
                  Acinetobacter_sp_ADP1
                  Aeromonas_salmonicida_A449
                  Aeromonas_hydrophila_ATCC_7966
                  Tolumonas_auensis_DSM_9187
                  Shewanella_MR-7
                  Shewanella_MR-4
                  Shewanella_ANA-3
                  Shewanella_W3-18-1
                  Shewanella_putrefaciens_CN-32
                  Shewanella_baltica_OS195
                  Shewanella_baltica_OS223
                  Shewanella_baltica_OS185
                  Shewanella_baltica_OS155
                  Shewanella_oneidensis
                  Shewanella_frigidimarina_NCIMB_400
                  Shewanella_denitrificans_OS217
                  Shewanella_amazonensis_SB2B
                  Shewanella_halifaxensis_HAW_EB4
                  Shewanella_pealeana_ATCC_700345
                  Shewanella_piezotolerans_WP3
                  Shewanella_loihica_PV-4
                  Shewanella_woodyi_ATCC_51908
                  Shewanella_sediminis_HAW-EB3
                  Pseudoalteromonas_haloplanktis_TAC125
                  Xenorhabdus_bovienii_SS_2004_uid46345
                  Proteus_mirabilis
                  Klebsiella_pneumoniae_MGH_78578
                  Klebsiella_pneumoniae_NTUH_K2044
                  Klebsiella_variicola_At_22_uid42113
                  Klebsiella_pneumoniae_342
                  Enterobacter_638
                  Dickeya_dadantii_Ech586
                  Dickeya_zeae_Ech1591
                  Pectobacterium_wasabiae_WPP163
                  Erwinia_carotovora_atroseptica_SCRI1043
                  Pectobacterium_carotovorum_PC1
                  Serratia_proteamaculans_568
                  Dickeya_dadantii_Ech703
                  Salmonella_enterica_serovar_Gallinarum_287_91
                  Salmonella_enterica_serovar_Enteritidis_P125109
                  Salmonella_enterica_serovar_Dublin_CT_02021853
                  Salmonella_typhimurium_LT2
                  Salmonella_enterica_serovar_Heidelberg_SL476
                  Salmonella_enterica_serovar_Paratyphi_C_RKS4594
                  Salmonella_enterica_serovar_Newport_SL254
                  Salmonella_typhi
                  Salmonella_enterica_serovar_Typhi_Ty2
                  Salmonella_enterica_serovar_Agona_SL483
                  Salmonella_enterica_Paratypi_ATCC_9150
                  Salmonella_enterica_serovar_Paratyphi_A_AKU_12601
                  Salmonella_enterica_serovar_Paratyphi_B_SPB7
                  Salmonella_enterica_serovar_Schwarzengrund_CVM19633
                  Salmonella_enterica_arizonae_serovar_62_z4_z23__
                  Salmonella_enterica_Choleraesuis
                  Citrobacter_koseri_ATCC_BAA-895
                  Citrobacter_rodentium_ICC168
                  Escherichia_coli_O103_H2_12009
                  Escherichia_coli_O111_H__11128
                  Escherichia_coli_O26_H11_11368
                  Escherichia_coli_C_ATCC_8739
                  Escherichia_coli_IAI39
                  Escherichia_coli_B_REL606
                  Escherichia_coli_BL21_DE3
                  Escherichia_coli_SE11
                  Escherichia_coli_O157H7
                  Escherichia_coli_O157_H7_TW14359
                  Escherichia_coli_O157_H7_EC4115
                  Escherichia_coli_K_12_substr__W3110
                  Escherichia_coli_SMS_3_5
                  Escherichia_coli_APEC_O1
                  Shigella_boydii_Sb227
                  Shigella_boydii_CDC_3083_94
                  Escherichia_coli_ED1a
                  Escherichia_coli_0127_H6_E2348_69
                  Escherichia_coli_UTI89
                  Escherichia_coli_S88
                  Escherichia_coli_K_12_substr__MG1655
                  Haemophilus_ducreyi_35000HP
                  Escherichia_coli_O55_H7_CB9615_uid46655
                  Escherichia_coli_O157H7_EDL933
                  Escherichia_coli_55989
                  Escherichia_coli_BW2952
                  Shigella_flexneri_2a_2457T
                  Escherichia_coli_IAI1
                  Escherichia_coli_E24377A
                  Escherichia_coli_HS
                  Escherichia_coli_UMN026
                  Escherichia_coli_536
                  Escherichia_fergusonii_ATCC_35469
                  Shigella_sonnei_Ss046
                  Escherichia_coli_K_12_substr__DH10B
                  Shigella_flexneri_5_8401
                  Shigella_flexneri_2a
                  Shigella_dysenteriae
                  Escherichia_coli_CFT073
                  Enterobacter_sakazakii_ATCC_BAA-894
                  Cronobacter_turicensis_z3032_uid40821
                  Erwinia_amylovora_ATCC_49946_uid46943
                  Erwinia_pyrifoliae_Ep1_96_uid40659
                  Erwinia_amylovora_uid46839
                  Erwinia_tasmaniensis
                  Pantoea_ananatis_LMG_20103_uid46807
                  Yersinia_pseudotuberculosis_YPIII
                  Yersinia_pestis_Angola
                  Yersinia_pestis_CO92
                  Yersinia_pseudotuberculosis_IP_31758
                  Yersinia_pestis_biovar_Microtus_91001
                  Yersinia_pestis_Nepal516
                  Yersinia_pestis_Pestoides_F
                  Yersinia_pestis_KIM_10_uid288
                  Yersinia_pestis_Antiqua
                  Yersinia_pseudotuberculosis_PB1_
                  Yersinia_pseudotuberculosis_IP32953
                  Yersinia_enterocolitica_8081
                  Edwardsiella_ictaluri_93_146
                  Edwardsiella_tarda_EIB202
                  Sodalis_glossinidius_morsitans
                  Photorhabdus_luminescens
                  Photorhabdus_asymbiotica
                  Candidatus_Hamiltonella_defensa_5AT__Acyrthosiphon_pisum_
                  Candidatus_Blochmannia_floridanus
                  Candidatus_Blochmannia_pennsylvanicus_BPEN
                  Vibrio_parahaemolyticus
                  Vibrio_Ex25
                  Vibrio_harveyi_ATCC_BAA-1116
                  Vibrio_vulnificus_YJ016
                  Vibrio_splendidus_LGP32
                  Vibrio_fischeri_ES114
                  Vibrio_fischeri_MJ11
                  Aliivibrio_salmonicida_LFI1238
                  Photobacterium_profundum_SS9
                  Vibrio_cholerae_MJ_1236
                  Vibrio_cholerae
                  Vibrio_cholerae_M66_2
                  Vibrio_cholerae_O395
                  Baumannia_cicadellinicola_Homalodisca_coagulata
                  Colwellia_psychrerythraea_34H
                  Wigglesworthia_brevipalpis
                  Idiomarina_loihiensis_L2TR
                  Psychromonas_ingrahamii_37
                  Pseudoalteromonas_atlantica_T6c
                  Alteromonas_macleodii__Deep_ecotype_
                  Buchnera_aphidicola_Tuc7__Acyrthosiphon_pisum_
                  Buchnera_aphidicola_5A__Acyrthosiphon_pisum_
                  Buchnera_sp
                  Buchnera_aphidicola_Sg
                  Buchnera_aphidicola
                  Buchnera_aphidicola_Cc_Cinara_cedri
                  Pasteurella_multocida
                  Haemophilus_parasuis_SH0165
                  Haemophilus_influenzae_PittGG
                  Haemophilus_influenzae_86_028NP
                  Haemophilus_influenzae_PittEE
                  Haemophilus_influenzae
                  Aggregatibacter_actinomycetemcomitans_D11S_1
                  Aggregatibacter_aphrophilus_NJ8700
                  Mannheimia_succiniciproducens_MBEL55E
                  Actinobacillus_succinogenes_130Z
                  Actinobacillus_pleuropneumoniae_serovar_7_AP76
                  Actinobacillus_pleuropneumoniae_serovar_3_JL03
                  Actinobacillus_pleuropneumoniae_L20
                  Haemophilus_somnus_129PT
                  Haemophilus_somnus_2336
                  Acidithiobacillus_ferrooxidans_ATCC_23270
                  Acidithiobacillus_ferrooxidans_ATCC_53993
                  Xanthomonas_oryzae_KACC10331
                  Xanthomonas_oryzae_PXO99A
                  Xanthomonas_oryzae_MAFF_311018
                  Xanthomonas_campestris_ATCC_33913
                  Xanthomonas_campestris_B100
                  Xanthomonas_campestris_8004
                  Xanthomonas_campestris_vesicatoria_85-10
                  Xanthomonas_citri
                  Xanthomonas_albilineans
                  Stenotrophomonas_maltophilia_R551_3
                  Stenotrophomonas_maltophilia_K279a
                  Xylella_fastidiosa_M12
                  Xylella_fastidiosa
                  Xylella_fastidiosa_Temecula1
                  Xylella_fastidiosa_M23
                  Candidatus_Vesicomyosocius_okutanii_HA
                  Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
                  Dichelobacter_nodosus_VCS1703A
                  Cupriavidus_taiwanensis
                  Ralstonia_eutropha_H16
                  Cupriavidus_metallidurans_CH34_uid250
                  Ralstonia_eutropha_JMP134
                  Ralstonia_pickettii_12J
                  Ralstonia_pickettii_12D
                  Ralstonia_solanacearum
                  Polynucleobacter_necessarius_asymbioticus_QLW_P1DMWA_1
                  Polynucleobacter_necessarius_STIR1
                  Burkholderia_phytofirmans_PsJN
                  Burkholderia_xenovorans_LB400
                  Burkholderia_phymatum_STM815
                  Burkholderia_cenocepacia_HI2424
                  Burkholderia_cenocepacia_MC0_3
                  Burkholderia_cenocepacia_AU_1054
                  Burkholderia_cenocepacia_J2315
                  Burkholderia_ambifaria_MC40_6
                  Burkholderia_ambifaria_AMMD
                  Burkholderia_383
                  Burkholderia_vietnamiensis_G4
                  Burkholderia_multivorans_ATCC_17616_JGI
                  Burkholderia_multivorans_ATCC_17616_Tohoku
                  Burkholderia_glumae_BGR1
                  Burkholderia_mallei_NCTC_10229
                  Burkholderia_mallei_NCTC_10247
                  Burkholderia_mallei_SAVP1
                  Burkholderia_mallei_ATCC_23344
                  Burkholderia_pseudomallei_MSHR346
                  Burkholderia_pseudomallei_1106a
                  Burkholderia_pseudomallei_K96243
                  Burkholderia_pseudomallei_1710b
                  Burkholderia_pseudomallei_668
                  Burkholderia_thailandensis_E264
                  Herminiimonas_arsenicoxydans
                  Janthinobacterium_Marseille
                  Bordetella_pertussis
                  Bordetella_parapertussis
                  Bordetella_bronchiseptica
                  Bordetella_avium_197N
                  Bordetella_petrii
                  Delftia_acidovorans_SPH-1
                  Comamonas_testosteroni_CNB_1
                  Polaromonas_JS666
                  Polaromonas_naphthalenivorans_CJ2
                  Variovorax_paradoxus_S110
                  Rhodoferax_ferrireducens_T118
                  Acidovorax_JS42
                  Diaphorobacter_TPSY_uid29975
                  Acidovorax_avenae_citrulli_AAC00-1
                  Verminephrobacter_eiseniae_EF01-2
                  Methylibium_petroleiphilum_PM1
                  Leptothrix_cholodnii_SP_6
                  Dechloromonas_aromatica_RCB
                  Candidatus_Accumulibacter_phosphatis_clade_IIA_UW_1
                  Sideroxydans_lithotrophicus_ES_1_uid46801
                  Azoarcus_BH72
                  Aromatoleum_aromaticum_EbN1
                  Thauera_MZ1T
                  Nitrosomonas_europaea
                  Nitrosomonas_eutropha_C71
                  Nitrosospira_multiformis_ATCC_25196
                  Methylobacillus_flagellatus_KT
                  Methylovorus_SIP3_4
                  Methylotenera_mobilis_JLW8
                  Thiobacillus_denitrificans_ATCC_25259
                  Chromobacterium_violaceum
                  Laribacter_hongkongensis_HLHK9
                  Neisseria_meningitidis_MC58
                  Neisseria_meningitidis_Z2491
                  Neisseria_meningitidis_053442
                  Neisseria_meningitidis_alpha14
                  Neisseria_meningitidis_FAM18
                  Neisseria_gonorrhoeae_FA_1090
                  Neisseria_gonorrhoeae_NCCP11945
                  Thiomicrospira_crunogena_XCL-2
                  Francisella_tularensis_FSC_198
                  Francisella_tularensis_tularensis
                  Francisella_tularensis_WY96-3418
                  Francisella_tularensis_novicida_U112
                  Francisella_tularensis_mediasiatica_FSC147
                  Francisella_tularensis_holarctica_OSU18
                  Francisella_tularensis_holarctica
                  Francisella_tularensis_holarctica_FTNF002_00
                  Francisella_philomiragia_ATCC_25017
                  Leptospira_interrogans_serovar_Copenhageni
                  Leptospira_interrogans_serovar_Lai
                  Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
                  Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
                  Leptospira_biflexa_serovar_Patoc__Patoc_1__Ames_
                  Leptospira_biflexa_serovar_Patoc__Patoc_1__Paris_
                  Helicobacter_mustelae_12198_uid46647
                  Helicobacter_hepaticus
                  Helicobacter_pylori_B38_uid39685
                  Helicobacter_pylori_G27
                  Helicobacter_pylori_Shi470
                  Helicobacter_pylori_HPAG1
                  Helicobacter_pylori_P12
                  Helicobacter_pylori_26695
                  Helicobacter_pylori_J99
                  Helicobacter_acinonychis_Sheeba
                  Wolinella_succinogenes
                  Sulfurovum_NBC37-1
                  Thiomicrospira_denitrificans_ATCC_33889
                  Campylobacter_concisus_13826
                  Campylobacter_curvus_525_92
                  Campylobacter_fetus_82-40
                  Campylobacter_jejuni
                  Campylobacter_jejuni_81116
                  Campylobacter_jejuni_81-176
                  Campylobacter_jejuni_doylei_269_97
                  Campylobacter_jejuni_RM1221
                  Campylobacter_lari_RM2100
                  Campylobacter_hominis_ATCC_BAA-381
                  Sulfurospirillum_deleyianum_DSM_6946
                  Arcobacter_butzleri_RM4018
                  Nautilia_profundicola_AmH
                  Nitratiruptor_SB155-2
                  Candidatus_Hodgkinia_cicadicola_Dsem
                  Candidatus_Koribacter_versatilis_Ellin345
                  Acidobacterium_capsulatum_ATCC_51196
                  Solibacter_usitatus_Ellin6076
                  Coprothermobacter_proteolyticus_DSM_5265
                  Dehalococcoides_VS
                  Dehalococcoides_ethenogenes_195
                  Dehalococcoides_CBDB1
                  Dehalococcoides_BAV1
                  Petrotoga_mobilis_SJ95
                  Methylacidiphilum_infernorum_V4
                  Akkermansia_muciniphila_ATCC_BAA_835
                  Opitutus_terrae_PB90_1
                  uncultured_Termite_group_1_bacterium_phylotype_Rs_D17
                  Elusimicrobium_minutum_Pei191
                  Treponema_pallidum_SS14
                  Treponema_pallidum
                  Treponema_denticola_ATCC_35405
                  Borrelia_burgdorferi_ZS7
                  Borrelia_burgdorferi
                  Borrelia_garinii_PBi
                  Borrelia_afzelii_PKo
                  Borrelia_recurrentis_A1
                  Borrelia_duttonii_Ly
                  Borrelia_hermsii_DAH
                  Borrelia_turicatae_91E135
                  Chlorobium_phaeobacteroides_DSM_266
                  Pelodictyon_phaeoclathratiforme_BU_1
                  Chlorobium_luteolum_DSM_273
                  Prosthecochloris_vibrioformis_DSM_265
                  Chlorobium_limicola_DSM_245
                  Chlorobaculum_parvum_NCIB_8327
                  Chlorobium_tepidum_TLS
                  Chlorobium_chlorochromatii_CaD3
                  Prosthecochloris_aestuarii_DSM_271
                  Chlorobium_phaeobacteroides_BS1
                  Chloroherpeton_thalassium_ATCC_35110
                  Thermocrinis_albus_DSM_14484_uid46231
                  Hydrogenobacter_thermophilus_TK_6_uid45927
                  Aquifex_aeolicus
                  Hydrogenobaculum_Y04AAS1
                  Sulfurihydrogenibium_azorense_Az_Fu1
                  Sulfurihydrogenibium_YO3AOP1
                  Persephonella_marina_EX_H1
                  Sebaldella_termitidis_ATCC_33386
                  Leptotrichia_buccalis_DSM_1135
                  Streptobacillus_moniliformis_DSM_12112
                  Fusobacterium_nucleatum
                  Fibrobacter_succinogenes_S85
                  Brachyspira_hyodysenteriae_WA1
                  Dyadobacter_fermentans_DSM_18053
                  Spirosoma_linguale_DSM_74_uid43413
                  Cytophaga_hutchinsonii_ATCC_33406
                  Pedobacter_heparinus_DSM_2366
                  Candidatus_Amoebophilus_asiaticus_5a2
                  Chitinophaga_pinensis_DSM_2588
                  Flavobacterium_psychrophilum_JIP02_86
                  Flavobacterium_johnsoniae_UW101
                  Capnocytophaga_ochracea_DSM_7271
                  Gramella_forsetii_KT0803
                  Robiginitalea_biformata_HTCC2501
                  Flavobacteriaceae_bacterium_3519_10
                  Candidatus_Sulcia_muelleri_GWSS
                  Candidatus_Sulcia_muelleri_SMDSEM
                  Blattabacterium__Periplaneta_americana__BPLAN
                  Blattabacterium__Blattella_germanica__Bge
                  Bacteroides_fragilis_NCTC_9434
                  Bacteroides_fragilis_YCH46
                  Bacteroides_thetaiotaomicron_VPI-5482
                  Bacteroides_vulgatus_ATCC_8482
                  Parabacteroides_distasonis_ATCC_8503
                  Porphyromonas_gingivalis_ATCC_33277
                  Porphyromonas_gingivalis_W83
                  Candidatus_Azobacteroides_pseudotrichonymphae_genomovar__CFP2
                  Chlamydia_trachomatis_D_UW_3_CX
                  Chlamydia_trachomatis_B_Jali20_OT
                  Chlamydia_trachomatis_A_HAR-13
                  Chlamydia_trachomatis_B_TZ1A828_OT
                  Chlamydia_trachomatis_L2b_UCH_1_proctitis
                  Chlamydia_trachomatis_434_Bu
                  Chlamydia_muridarum
                  Chlamydophila_caviae
                  Chlamydophila_abortus_S26_3
                  Chlamydophila_felis_Fe_C-56
                  Chlamydophila_pneumoniae_AR39
                  Chlamydophila_pneumoniae_TW_183
                  Chlamydophila_pneumoniae_CWL029
                  Chlamydophila_pneumoniae_J138
                  Parachlamydia_sp_UWE25
                  Pirellula_sp
                  Pirellula_staleyi_DSM_6068_uid43209
                  Candidatus_Carsonella_ruddii_PV
                  Methanococcus_maripaludis_C5
                  Methanococcus_maripaludis_C7
                  Methanococcus_maripaludis_C6
                  Methanococcus_maripaludis_S2
                  Methanococcus_vannielii_SB
                  Methanococcus_aeolicus_Nankai-3
                  Methanococcus_jannaschii
                  Methanocaldococcus_fervens_AG86
                  Methanocaldococcus_FS406_22_uid42499
                  Methanocaldococcus_vulcanius_M7
                  Pyrococcus_abyssi
                  Pyrococcus_horikoshii
                  Pyrococcus_furiosus
                  Thermococcus_gammatolerans_EJ3
                  Thermococcus_kodakaraensis_KOD1
                  Thermococcus_onnurineus_NA1
                  Thermococcus_sibiricus_MM_739
                  Ferroglobus_placidus_DSM_10642_uid40863
                  Archaeoglobus_profundus_DSM_5631_uid43493
                  Archaeoglobus_fulgidus
                  Methanopyrus_kandleri
                  Aciduliprofundum_boonei_T469_uid43333
                  Thermoplasma_acidophilum
                  Thermoplasma_volcanium
                  Picrophilus_torridus_DSM_9790
                  Sulfolobus_tokodaii
                  Sulfolobus_acidocaldarius_DSM_639
                  Sulfolobus_islandicus_M_16_27
                  Sulfolobus_islandicus_Y_G_57_14
                  Sulfolobus_islandicus_M_14_25
                  Sulfolobus_islandicus_M_16_4
                  Sulfolobus_solfataricus
                  Sulfolobus_islandicus_L_D_8_5_uid43679
                  Sulfolobus_islandicus_L_S_2_15
                  Sulfolobus_islandicus_Y_N_15_51
                  Metallosphaera_sedula_DSM_5348
                  Staphylothermus_marinus_F1
                  Desulfurococcus_kamchatkensis_1221n
                  Hyperthermus_butylicus
                  Ignicoccus_hospitalis_KIN4_I
                  Aeropyrum_pernix
                  Thermofilum_pendens_Hrk_5
                  Pyrobaculum_aerophilum
                  Pyrobaculum_arsenaticum_DSM_13514
                  Pyrobaculum_calidifontis_JCM_11548
                  Pyrobaculum_islandicum_DSM_4184
                  Thermoproteus_neutrophilus_V24Sta
                  Caldivirga_maquilingensis_IC-167
                  Methanobrevibacter_ruminantium_M1_uid45857
                  Methanobrevibacter_smithii_ATCC_35061
                  Methanobacterium_thermoautotrophicum
                  Methanosphaera_stadtmanae
                  Nanoarchaeum_equitans
                  Candidatus_Korarchaeum_cryptofilum_OPF8
                  Candidatus_Methanoregula_boonei_6A8
                  Candidatus_Methanosphaerula_palustris_E1_9c
                  Methanoculleus_marisnigri_JR1
                  Methanospirillum_hungatei_JF-1
                  Methanocorpusculum_labreanum_Z
                  Methanocella_paludicola_SANAE
                  uncultured_methanogenic_archaeon_RC-I
                  Methanosarcina_mazei
                  Methanosarcina_acetivorans
                  Methanosarcina_barkeri_fusaro
                  Methanococcoides_burtonii_DSM_6242
                  Methanosaeta_thermophila_PT
                  Haloferax_volcanii_DS2_uid46845
                  Haloquadratum_walsbyi
                  Halorhabdus_utahensis_DSM_12940
                  Natronomonas_pharaonis
                  Halobacterium_salinarum_R1
                  Halobacterium_sp
                  Natrialba_magadii_ATCC_43099_uid46245
                  Haloterrigena_turkmenica_DSM_5511_uid43501
                  Halomicrobium_mukohataei_DSM_12286
                  Haloarcula_marismortui_ATCC_43049
                  Halorubrum_lacusprofundi_ATCC_49239
                  Nitrosopumilus_maritimus_SCM1

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