BLASTP 2.2.5 [Nov-16-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1039970303-015998-9993

Query= 
         (1906 letters)


Database: Non-redundant SwissProt sequences 
           121,095 sequences; 44,164,384 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 1

Taxonomy reports

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold

                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|24418363|sp|Q8R418|DICE_MOUSE  Endoribonuclease Dicer (Double-...  3830   0.0   

 gi|24418367|sp|Q9UPY3|DICE_HUMAN  Endoribonuclease Dicer (Helicas...  3522   0.0   

 gi|21431882|sp|P34529|DCR1_CAEEL  Endoribonuclease dcr-1               535   e-151 

 gi|1351642|sp|Q09884|YC9A_SCHPO  Putative helicase C584.10c             99   9e-20 

 gi|20139354|sp|Q9KA05|RNC_BACHD  Ribonuclease III (RNase III)           79   7e-14 

 gi|22654060|sp|Q8Y691|RNC_LISMO  Ribonuclease III (RNase III)           79   1e-13 

 gi|22654065|sp|Q92AK3|RNC_LISIN  Ribonuclease III (RNase III)           77   4e-13 

 gi|7531275|sp|P51833|RNC_BACSU  Ribonuclease III (RNase III)            75   9e-13 

 gi|2500554|sp|P74368|RNC_SYNY3  Ribonuclease III (RNase III)            74   2e-12 

 gi|7531189|sp|O67082|RNC_AQUAE  Ribonuclease III (RNase III)            72   2e-11 

 gi|7531197|sp|Q9ZBQ7|RNC_STRCO  Ribonuclease III (RNase III)            71   2e-11 

 gi|22654076|sp|Q9PM40|RNC_CAMJE  Ribonuclease III (RNase III)           70   4e-11 

 gi|22654052|sp|Q8R9W3|RNC_THETN  Ribonuclease III (RNase III)           70   4e-11 

 gi|22654070|sp|Q97QG6|RNC_STRPN  Ribonuclease III (RNase III)           69   9e-11 

 gi|7531195|sp|Q9XCX9|RNC_PSEAE  Ribonuclease III (RNase III)            68   2e-10 

 gi|22654072|sp|Q9A105|RNC_STRPY  Ribonuclease III (RNase III)           66   7e-10 

 gi|1710608|sp|P51837|RNC_COXBU  Ribonuclease III (RNase III)            65   2e-09 

 gi|1173093|sp|P44441|RNC_HAEIN  Ribonuclease III (RNase III)            65   2e-09 

 gi|6226018|sp|Q9ZE31|RNC_RICPR  Ribonuclease III (RNase III)            64   2e-09 

 gi|13431826|sp|P57805|RNC_PASMU  Ribonuclease III (RNase III)           64   2e-09 

 gi|2500556|sp|Q98514|A464_CHVP1  Putative protein A464R                 64   4e-09 

 gi|7531193|sp|O84299|RNC_CHLTR  Ribonuclease III (RNase III)            63   6e-09 

 gi|25009123|sp|Q8K9R1|RNC_BUCAP  Ribonuclease III (RNase III)           63   6e-09 

 gi|22654066|sp|Q92JB0|RNC_RICCN  Ribonuclease III (RNase III)           63   7e-09 

 gi|7531276|sp|P56118|RNC_HELPY  Ribonuclease III (RNase III)            62   8e-09 

 gi|11134313|sp|P57346|RNC_BUCAI  Ribonuclease III (RNase III)           61   2e-08 

 gi|18203192|sp|Q9KPB2|RNC_VIBCH  Ribonuclease III (RNase III)           61   2e-08 

 gi|22654058|sp|Q8XJN8|RNC_CLOPE  Ribonuclease III (RNase III)           61   2e-08 

 gi|7531198|sp|Q9ZLH2|RNC_HELPJ  Ribonuclease III (RNase III)            60   3e-08 

 gi|22654067|sp|Q92R47|RNC_RHIME  Ribonuclease III (RNase III)           60   3e-08 

 gi|22654074|sp|Q9JVD3|RNC_NEIMA  Ribonuclease III (RNase III)           60   4e-08 

 gi|22654057|sp|Q8UGK2|RNC_AGRT5  Ribonuclease III (RNase III)           60   5e-08 

 gi|1350804|sp|P47607|RNC_MYCGE  Ribonuclease III (RNase III)            60   5e-08 

 gi|13878715|sp|Q9PK97|RNC_CHLMU  Ribonuclease III (RNase III)           60   5e-08 

 gi|2500553|sp|Q53844|RNC_SPICI  Ribonuclease III (RNase III)            60   6e-08 

 gi|22654075|sp|Q9K0C8|RNC_NEIMB  Ribonuclease III (RNase III)           59   7e-08 

 gi|7531194|sp|Q9X0I6|RNC_THEMA  Ribonuclease III (RNase III)            59   7e-08 

 gi|22654068|sp|Q931T1|RNC_STAAM  Ribonuclease III (RNase III)           59   8e-08 

 gi|22654071|sp|Q99UN7|RNC_STAAN  Ribonuclease III (RNase III)           59   1e-07 

 gi|22654059|sp|Q8Y0I1|RNC_RALSO  Ribonuclease III (RNase III)           58   2e-07 

 gi|20139357|sp|Q9NRR4|RNC_HUMAN  Ribonuclease III (RNase III) (p241)    58   2e-07 

 gi|22654053|sp|Q8RGX3|RNC_FUSNN  Ribonuclease III (RNase III)           57   3e-07 

 gi|731740|sp|P38719|DBP8_YEAST  Probable ATP-dependent RNA helica...    57   4e-07 

 gi|22654061|sp|Q8YG74|RNC_BRUME  Ribonuclease III (RNase III)           56   6e-07 

 gi|7531190|sp|O69161|RNC_BRAJA  Ribonuclease III (RNase III)            56   8e-07 

 gi|7531191|sp|Q9Z9C7|RNC_CHLPN  Ribonuclease III (RNase III)            55   1e-06 

 gi|7531188|sp|O51648|RNC_BORBU  Ribonuclease III (RNase III)            54   2e-06 

 gi|731905|sp|P40562|YIS2_YEAST  Putative ATP-dependent RNA helica...    54   3e-06 

 gi|22654063|sp|Q8Z4K4|RNC_SALTI  Ribonuclease III (RNase III)           53   5e-06 

 gi|20141650|sp|Q56056|RNC_SALTY  Ribonuclease III (RNase III)           53   5e-06 

 gi|22654062|sp|Q8Z023|RNC_ANASP  Ribonuclease III (RNase III)           53   6e-06 

 gi|133151|sp|P05797|RNC_ECOLI  Ribonuclease III (RNase III)             53   7e-06 

 gi|1710609|sp|Q10962|RNC_MYCTU  Ribonuclease III (RNase III)            52   1e-05 

 gi|465975|sp|P34580|YN21_CAEEL  Putative ATP-dependent RNA helica...    52   1e-05 

 gi|21542025|sp|O13370|DED1_SCHPO  ATP-dependent RNA helicase ded1       52   1e-05 

 gi|113825|sp|P24346|AN3_XENLA  Putative ATP-dependent RNA helicas...    52   1e-05 

 gi|3023628|sp|O00571|DDX3_HUMAN  DEAD-box protein 3 (Helicase-lik...    51   2e-05 

 gi|20141625|sp|O01326|RNC_CAEEL  Ribonuclease III (RNase III)           51   2e-05 

 gi|2500528|sp|Q62167|DDX3_MOUSE  DEAD-box protein 3 (DEAD-box RNA...    51   3e-05 

 gi|6014945|sp|O15523|DDXY_HUMAN  DEAD-box protein 3, Y-chromosomal      50   4e-05 

 gi|2500551|sp|P75233|RNC_MYCPN  Ribonuclease III (RNase III)            50   4e-05 

 gi|130256|sp|P16381|PL10_MOUSE  Putative ATP-dependent RNA helica...    50   4e-05 

 gi|2500524|sp|Q12099|FAL1_YEAST  Probable ATP-dependent RNA helic...    50   5e-05 

 gi|22654069|sp|Q97IA4|RNC_CLOAB  Ribonuclease III (RNase III)           50   5e-05 

 gi|22654077|sp|Q9PQT8|RNC_UREPA  Ribonuclease III (RNase III)           50   5e-05 

 gi|124217|sp|P27639|IF4A_CAEEL  Eukaryotic initiation factor 4A (...    50   5e-05 

 gi|2500514|sp|Q25225|IF4A_LEIBR  Probable eukaryotic initiation f...    50   5e-05 

 gi|13878708|sp|Q9CHD0|RNC_LACLA  Ribonuclease III (RNase III)           50   6e-05 

 gi|2500552|sp|Q52698|RNC_RHOCA  Ribonuclease III (RNase III)            49   1e-04 

 gi|7531196|sp|Q9Z5U2|RNC_ZYMMO  Ribonuclease III (RNase III)            49   1e-04 

 gi|1170505|sp|P41377|IF42_ARATH  Eukaryotic initiation factor 4A-...    49   1e-04 

 gi|20532400|sp|P38919|IF4N_HUMAN  Eukaryotic initiation factor 4A...    49   1e-04 

 gi|1170503|sp|P41376|IF41_ARATH  Eukaryotic initiation factor 4A-...    49   1e-04 

 gi|2500521|sp|Q40468|IF4Z_TOBAC  Eukaryotic initiation factor 4A-...    49   1e-04 

 gi|12644224|sp|P34689|GLH1_CAEEL  ATP-dependent RNA helicase glh-...    48   2e-04 

 gi|1169261|sp|P44586|DEAD_HAEIN  Cold-shock DEAD-box protein A ho...    48   2e-04 

 gi|2500557|sp|Q02555|RNT1_YEAST  Ribonuclease III (RNase III)           48   2e-04 

 gi|3915469|sp|Q58900|YF05_METJA  Putative ATP-dependent RNA helic...    48   2e-04 

 gi|1177010|sp|P42305|DBPA_BACSU  ATP-dependent RNA helicase dbpA        48   2e-04 

 gi|10720033|sp|O02494|IF4A_CRYPV  Eukaryotic initiation factor 4A...    48   2e-04 

 gi|731667|sp|P38712|RRP3_YEAST  ATP-dependent rRNA helicase RRP3        47   3e-04 

 gi|1175447|sp|Q09775|YA88_SCHPO  Putative ATP-dependent RNA helic...    47   3e-04 

 gi|1706311|sp|P24784|DBP1_YEAST  Probable ATP-dependent RNA helic...    47   3e-04 

 gi|2500517|sp|Q40471|IF49_TOBAC  Eukaryotic initiation factor 4A-...    47   3e-04 

 gi|1170508|sp|P41381|IF48_TOBAC  Eukaryotic initiation factor 4A-...    47   3e-04 

 gi|118411|sp|P06634|DED1_YEAST  Putative ATP-dependent RNA helica...    47   3e-04 

 gi|2500522|sp|Q41741|IF4A_MAIZE  Eukaryotic initiation factor 4A ...    47   3e-04 

 gi|547712|sp|P35683|IF4A_ORYSA  Eukaryotic initiation factor 4A (...    47   3e-04 

 gi|2500516|sp|Q40470|IF47_TOBAC  Eukaryotic initiation factor 4A-...    47   4e-04 

 gi|2500520|sp|Q40467|IF4Y_TOBAC  Eukaryotic initiation factor 4A-...    47   4e-04 

 gi|1170511|sp|P41382|IF4U_TOBAC  Eukaryotic initiation factor 4A-...    47   4e-04 

 gi|1170506|sp|P41379|IF42_NICPL  Eukaryotic initiation factor 4A-...    47   4e-04 

 gi|2500515|sp|Q40469|IF46_TOBAC  Eukaryotic initiation factor 4A-...    47   4e-04 

 gi|20141439|sp|Q61496|DDX4_MOUSE  DEAD-box protein 4 (VASA homolo...    47   5e-04 

 gi|1708151|sp|P20447|DBP3_YEAST  Probable ATP-dependent RNA helic...    47   6e-04 

 gi|20138033|sp|Q9NQI0|DDX4_HUMAN  DEAD-box protein 4 (VASA homolog)     46   7e-04 

 gi|1169228|sp|P46942|DB10_NICSY  RNA helicase-like protein DB10         46   7e-04 

 gi|7531192|sp|O69469|RNC_MYCLE  Ribonuclease III (RNase III)            46   8e-04 

 gi|1170509|sp|P41378|IF4A_WHEAT  Eukaryotic initiation factor 4A ...    46   8e-04 

 gi|2500535|sp|Q12389|DBPA_YEAST  Probable RNA-dependent helicase ...    46   9e-04 


Alignments





Etc.