Génome humain

Le bond après juillet 99 correspond à l'arrivée d'une nouvelle génération de séquenceurs (à capillaire)

Draft (brouillon): Pour atteindre le statut de brouillon, un clone doit avoir été séquencé au moins avec une couverture de 3. Ceci revient généralement à une couverture effective de 96%, avec des gaps de 500bp en moyenne. Au dessous d'une couverture 3, on parle de pré-draft.

Etat de séquençage des différents chromosomes à la sortie de l'article "Consortium". N50 indique la longueur L telle que 50% des nucléotides sont compris dans des contigs de taille L.

Comparaison des génomes Celera et HGS:

Comparison of the CSA and the PFP assembly. 
(A) All of chromosome 21, (B) all of chromosome 8, and (C) a 1-Mb
region of chromosome 8 representing a single Celera scaffold. To generate the
figure, Celera fragment sequences were mapped onto each assembly. The PFP 
assembly is indicated in the upper third of each panel; the Celera assembly is 
indicated in the lower third. In thecenter of the panel, green lines show Celera 
sequences that are in the same order and orientation in both assemblies and form 
the longest consistently ordered run of sequences. Yellow lines indicate sequence 
blocks that are in the same orientation, but out of order. Red lines indicate 
sequence blocks that are not in the same orientation. For clarity, in the latter 
two cases,lines are only drawn between segments of matching sequence that are at
least 50kb long. The top and bottom thirds of each panel show the extent of Celera 
mate-pair violations (red, misoriented; yellow, incorrect distance between the 
mates) for each assembly grouped by library size. (Mate pairs that are within
 the correct distance, as expected from the mean library insert size, are 
omitted from the figure for clarity.) Predicted breakpoints, corresponding 
to stacks of violated mate pairs of the same type, are shown as blue ticks on 
each assembly axis. Runs of more than 10,000 Ns are shown as cyan bars.