Ensembl

• génome + gènes + transcrits (humain et souris)
• Méthode d'obtention: Genscan sur contig, puis Blast vs prot, mRNA, EST, PFAM
• Version Juillet 2001: Confirmed genes: 21921 Predicted genes: 246366 Confirmed exons: 143479 Predicted exons: 770562 Transcripts: 23931 Contigs: 329154 Sequences: 29080 Base Pairs: 4318661441
• Plusieurs banques en une:
  • Peptides confirmés
  • "cDNA" confirmés
  • peptides prédits
  • Banque ADN (golden path)
• Des protocoles d'analyse bioinformatique..
  • How do I find 'my gene' in the genome?
  • How do I find all Ensembl genes with a given InterPro domain?
  • How do I find expression profile of a gene?
  • How do I find genomic sequences similar to my protein sequence?
  • How do I find proteins similar to my protein sequence?
  • How do I look up a positional marker and examine candidate disease genes in the region?
  • How do I use Ensembl?
  • What if a gene appears to be incorrectly positioned in the genome?
  • Repérez l'endroit exact
  • Récupérez la séquence génomique de ce gène.