BLASTP 2.2.5 [Nov-16-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.RID: 1039681788-020058-888
Query= (365 letters)
Database: Non-redundant SwissProt sequences 120,550 sequences; 43,980,924 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Score E Sequences producing significant alignments: (bits) Value gi|122158|sp|P18462|1A25_HUMAN HLA class I histocompatibili... 608 e-174 gi|1168209|sp|P30450|1A26_HUMAN HLA class I histocompatibil... 595 e-170 gi|231372|sp|P30457|1A66_HUMAN HLA class I histocompatibili... 591 e-169 gi|231371|sp|P30456|1A43_HUMAN HLA class I histocompatibili... 590 e-168 gi|231368|sp|P30453|1A34_HUMAN HLA class I histocompatibili... 585 e-167 gi|1168210|sp|P10314|1A32_HUMAN HLA class I histocompatibil... 582 e-166 gi|13124681|sp|P01891|1A68_HUMAN HLA class I histocompatibi... 573 e-163 gi|231346|sp|P30375|1A01_GORGO CLASS I HISTOCOMPATIBILITY A... 571 e-163 gi|231350|sp|P30377|1A03_GORGO CLASS I HISTOCOMPATIBILITY A... 565 e-161 gi|122157|sp|P13746|1A11_HUMAN HLA class I histocompatibili... 565 e-161 gi|231375|sp|P30459|1A74_HUMAN HLA class I histocompatibili... 564 e-160 gi|231370|sp|P30455|1A36_HUMAN HLA class I histocompatibili... 563 e-160 gi|122143|sp|P13749|1A04_PANTR CHLA CLASS I HISTOCOMPATIBIL... 560 e-159 gi|231347|sp|P30443|1A01_HUMAN HLA class I histocompatibili... 560 e-159 gi|122154|sp|P05534|1A24_HUMAN HLA class I histocompatibili... 560 e-159 gi|231359|sp|P30447|1A23_HUMAN HLA class I histocompatibili... 558 e-159 gi|122146|sp|P16209|1A01_PANTR CHLA CLASS I HISTOCOMPATIBIL... 558 e-159 gi|231351|sp|P13748|1A03_PANTR CHLA CLASS I HISTOCOMPATIBIL... 558 e-159 gi|2851527|sp|P16190|1A33_HUMAN HLA class I histocompatibil... 558 e-159 gi|122138|sp|P01892|1A02_HUMAN HLA class I histocompatibili... 557 e-158 gi|122145|sp|P04439|1A03_HUMAN HLA class I histocompatibili... 556 e-158 gi|231349|sp|P30376|1A02_GORGO CLASS I HISTOCOMPATIBILITY A... 552 e-157 gi|2851401|sp|P30512|1A29_HUMAN HLA class I histocompatibil... 551 e-157 gi|231367|sp|P16189|1A31_HUMAN HLA class I histocompatibili... 551 e-157 gi|231352|sp|P30378|1A04_GORGO CLASS I HISTOCOMPATIBILITY A... 547 e-155 gi|122123|sp|P16211|1A01_PONPY CLASS I HISTOCOMPATIBILITY A... 546 e-155 gi|1168212|sp|Q09160|1A80_HUMAN HLA class I histocompatibil... 542 e-154 gi|1345596|sp|P16188|1A30_HUMAN HLA class I histocompatibil... 541 e-154 gi|231440|sp|P30388|1OKO_GORGO CLASS I HISTOCOMPATIBILITY A... 524 e-148 gi|232260|sp|P01893|HLAH_HUMAN HLA class I histocompatibili... 521 e-148 gi|231376|sp|P30379|1B01_GORGO CLASS I HISTOCOMPATIBILITY A... 521 e-148 gi|231378|sp|P30380|1B02_GORGO CLASS I HISTOCOMPATIBILITY A... 520 e-147 gi|122166|sp|P10317|1B15_HUMAN HLA class I histocompatibili... 516 e-146 gi|231379|sp|P30381|1B03_GORGO CLASS I HISTOCOMPATIBILITY A... 516 e-146 gi|122174|sp|P18465|1B60_HUMAN HLA class I histocompatibili... 515 e-146 gi|122168|sp|P10319|1B62_HUMAN HLA class I histocompatibili... 515 e-146 gi|231437|sp|P30508|1C15_HUMAN HLA class I histocompatibili... 515 e-146 gi|231412|sp|P30489|1B52_HUMAN HLA class I histocompatibili... 515 e-146 gi|231414|sp|P30491|1B54_HUMAN HLA class I histocompatibili... 514 e-146 gi|231420|sp|P30497|1B61_HUMAN HLA class I histocompatibili... 513 e-145 gi|122164|sp|P03989|1B14_HUMAN HLA class I histocompatibili... 511 e-145 gi|122167|sp|P10318|1B18_HUMAN HLA class I histocompatibili... 511 e-145 gi|1168213|sp|Q08136|1B19_HUMAN HLA class I histocompatibil... 511 e-145 gi|122177|sp|P19373|1B16_HUMAN HLA class I histocompatibili... 510 e-144 gi|231430|sp|P30387|1C04_GORGO CLASS I HISTOCOMPATIBILITY A... 509 e-144 gi|122172|sp|P18464|1B49_HUMAN HLA class I histocompatibili... 509 e-144 gi|231426|sp|P30385|1C02_GORGO CLASS I HISTOCOMPATIBILITY A... 508 e-144 gi|231348|sp|P30515|1A01_SAGOE CLASS I HISTOCOMPATIBILITY A... 508 e-144 gi|231398|sp|P30475|1B31_HUMAN HLA class I histocompatibili... 508 e-144 gi|231391|sp|P30468|1B22_HUMAN HLA class I histocompatibili... 507 e-143 gi|231383|sp|P30462|1B07_HUMAN HLA class I histocompatibili... 507 e-143 gi|231432|sp|P30503|1C06_HUMAN HLA class I histocompatibili... 507 e-143 gi|231435|sp|P30506|1C13_HUMAN HLA class I histocompatibili... 506 e-143 gi|122163|sp|P13750|1B01_PANTR CHLA CLASS I HISTOCOMPATIBIL... 506 e-143 gi|231434|sp|P30505|1C12_HUMAN HLA class I histocompatibili... 506 e-143 gi|231384|sp|P30463|1B08_HUMAN HLA class I histocompatibili... 506 e-143 gi|231395|sp|P30472|1B26_HUMAN HLA class I histocompatibili... 506 e-143 gi|231385|sp|P30464|1B10_HUMAN HLA class I histocompatibili... 506 e-143 gi|1345600|sp|P30509|1C16_HUMAN HLA class I histocompatibil... 506 e-143 gi|231390|sp|P30685|1B21_HUMAN HLA class I histocompatibili... 505 e-143 gi|231403|sp|P30480|1B39_HUMAN HLA class I histocompatibili... 505 e-143 gi|231392|sp|P30469|1B23_HUMAN HLA class I histocompatibili... 505 e-143 gi|122162|sp|P01889|1B02_HUMAN HLA class I histocompatibili... 505 e-143 gi|231413|sp|P30490|1B53_HUMAN HLA class I histocompatibili... 505 e-143 gi|231408|sp|P30485|1B45_HUMAN HLA class I histocompatibili... 504 e-143 gi|231422|sp|P30383|1C01_GORGO CLASS I HISTOCOMPATIBILITY A... 504 e-142 gi|231405|sp|P30482|1B42_HUMAN HLA class I histocompatibili... 504 e-142 gi|543713|sp|Q07000|1C18_HUMAN HLA class I histocompatibili... 504 e-142 gi|231397|sp|P30474|1B28_HUMAN HLA class I histocompatibili... 503 e-142 gi|231394|sp|P30471|1B25_HUMAN HLA class I histocompatibili... 503 e-142 gi|231419|sp|P30496|1B59_HUMAN HLA class I histocompatibili... 503 e-142 gi|231399|sp|P30476|1B32_HUMAN HLA class I histocompatibili... 503 e-142 gi|231421|sp|P30498|1B63_HUMAN HLA class I histocompatibili... 503 e-142 gi|231407|sp|P30484|1B44_HUMAN HLA class I histocompatibili... 503 e-142 gi|122160|sp|P18463|1B29_HUMAN HLA class I histocompatibili... 503 e-142 gi|231436|sp|P30507|1C14_HUMAN HLA class I histocompatibili... 503 e-142 gi|231396|sp|P30473|1B27_HUMAN HLA class I histocompatibili... 502 e-142 gi|231404|sp|P30481|1B41_HUMAN HLA class I histocompatibili... 502 e-142 gi|231433|sp|P30504|1C07_HUMAN HLA class I histocompatibili... 500 e-141 gi|231381|sp|P30460|1B04_HUMAN HLA class I histocompatibili... 500 e-141 gi|231425|sp|P30517|1C01_SAGOE CLASS I HISTOCOMPATIBILITY A... 499 e-141 gi|231388|sp|P30466|1B13_HUMAN HLA class I histocompatibili... 499 e-141 gi|231431|sp|P30502|1C04_HUMAN HLA class I histocompatibili... 499 e-141 gi|231393|sp|P30470|1B24_HUMAN HLA class I histocompatibili... 499 e-141 gi|1345599|sp|P30487|1B47_HUMAN HLA class I histocompatibil... 499 e-141 gi|231382|sp|P30461|1B05_HUMAN HLA class I histocompatibili... 498 e-141 gi|231400|sp|P30477|1B35_HUMAN HLA class I histocompatibili... 498 e-141 gi|231416|sp|P30493|1B56_HUMAN HLA class I histocompatibili... 498 e-141 gi|231386|sp|P30465|1B11_HUMAN HLA class I histocompatibili... 498 e-141 gi|231401|sp|P30478|1B36_HUMAN HLA class I histocompatibili... 498 e-140 gi|231418|sp|P30495|1B58_HUMAN HLA class I histocompatibili... 497 e-140 gi|416557|sp|Q04826|1B34_HUMAN HLA class I histocompatibili... 497 e-140 gi|1345598|sp|P30513|1B12_HUMAN HLA class I histocompatibil... 497 e-140 gi|231417|sp|P30494|1B57_HUMAN HLA class I histocompatibili... 497 e-140 gi|231415|sp|P30492|1B55_HUMAN HLA class I histocompatibili... 497 e-140 gi|122180|sp|P04222|1C05_HUMAN HLA class I histocompatibili... 496 e-140 gi|231439|sp|P30510|1C17_HUMAN HLA class I histocompatibili... 496 e-140 gi|122171|sp|P10320|1B40_HUMAN HLA class I histocompatibili... 496 e-140 gi|231427|sp|P30500|1C02_HUMAN HLA class I histocompatibili... 494 e-140 gi|231429|sp|P30501|1C03_HUMAN HLA class I histocompatibili... 494 e-139Alignments
Database: Non-redundant SwissProt sequences Posted date: Dec 9, 2002 8:40 PM Number of letters in database: 43,980,924 Number of sequences in database: 120,550 Lambda K H 0.318 0.132 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,038,430 Number of Sequences: 120550 Number of extensions: 1279243 Number of successful extensions: 3130 Number of sequences better than 10.0: 369 Number of HSP's better than 10.0 without gapping: 257 Number of HSP's successfully gapped in prelim test: 112 Number of HSP's that attempted gapping in prelim test: 2620 Number of HSP's gapped (non-prelim): 445 length of query: 365 length of database: 43,980,924 effective HSP length: 109 effective length of query: 256 effective length of database: 30,840,974 effective search space: 7895289344 effective search space used: 7895289344 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)