Nucleotide
Protein
Translations
Retrieve results for an RID
Search
Set subsequence
From:
To:
Choose database
nr
est
est_human
est_mouse
est_others
gss
htgs
pat
yeast
mito
vector
ecoli
pdb
Drosophila genome
month
alu
dbsts
chromosome
wgs_anopheles
Now:
or
Options
for advanced blasting
Limit by entrez query
or select from:
(none)
Viruses [ORGN]
Archaea [ORGN]
Bacteria [ORGN]
Eukaryota [ORGN]
Viridiplantae [ORGN]
Fungi [ORGN]
Metazoa [ORGN]
Arthropoda [ORGN]
Vertebrata [ORGN]
Mammalia [ORGN]
Rodentia [ORGN]
Primates [ORGN]
-------------------
Aeropyrum pernix [ORGN]
Aquifex aeolicus [ORGN]
Arabidopsis thaliana [ORGN]
Bacillus subtilis [ORGN]
Bos taurus [ORGN]
Caenorhabditis elegans [ORGN]
Danio rerio [ORGN]
Dictyostelium discoideum [ORGN]
Drosophila melanogaster [ORGN]
Escherichia coli [ORGN]
Gallus gallus [ORGN]
Homo sapiens [ORGN]
Human immunodeficiency virus type 1 [ORGN]
Methanococcus jannaschii [ORGN]
Mus musculus [ORGN]
Oryctolagus cuniculus [ORGN]
Oryza sativa [ORGN]
Ovis aries [ORGN]
Plasmodium falciparum [ORGN]
Rattus norvegicus [ORGN]
Saccharomyces cerevisiae [ORGN]
Schizosaccharomyces pombe [ORGN]
Simian immunodeficiency virus [ORGN]
Synechocystis PCC6803 [ORGN]
Takifugu rubripes [ORGN]
Xenopus laevis [ORGN]
Zea mays [ORGN]
Choose filter
Low complexity
Human repeats
Mask for lookup table only
Mask lower case
Expect
Word Size
7
11
15
Other advanced
Format
Show
Graphical Overview
Linkout
Sequence Retrieval
NCBI-gi
Alignment
PSSM
Bioseq
in
HTML
Plain text
ASN.1
XML
format
Number of:
Descriptions
0
10
50
100
250
500
1000
Alignments
0
10
50
100
250
500
1000
Alignment view
Pairwise
query-anchored with identities
query-anchored without identities
flat query-anchored with identities
flat query-anchored without identities
Hit Table
Limit results by entrez query
or select from:
(none)
Viruses [ORGN]
Archaea [ORGN]
Bacteria [ORGN]
Eukaryota [ORGN]
Viridiplantae [ORGN]
Fungi [ORGN]
Metazoa [ORGN]
Arthropoda [ORGN]
Vertebrata [ORGN]
Mammalia [ORGN]
Rodentia [ORGN]
Primates [ORGN]
-------------------
Aeropyrum pernix [ORGN]
Aquifex aeolicus [ORGN]
Arabidopsis thaliana [ORGN]
Bacillus subtilis [ORGN]
Bos taurus [ORGN]
Caenorhabditis elegans [ORGN]
Danio rerio [ORGN]
Dictyostelium discoideum [ORGN]
Drosophila melanogaster [ORGN]
Escherichia coli [ORGN]
Gallus gallus [ORGN]
Homo sapiens [ORGN]
Human immunodeficiency virus type 1 [ORGN]
Methanococcus jannaschii [ORGN]
Mus musculus [ORGN]
Oryctolagus cuniculus [ORGN]
Oryza sativa [ORGN]
Ovis aries [ORGN]
Plasmodium falciparum [ORGN]
Rattus norvegicus [ORGN]
Saccharomyces cerevisiae [ORGN]
Schizosaccharomyces pombe [ORGN]
Simian immunodeficiency virus [ORGN]
Synechocystis PCC6803 [ORGN]
Takifugu rubripes [ORGN]
Xenopus laevis [ORGN]
Zea mays [ORGN]
Expect value range:
Layout:
One Window
Two Windows
Formatting options on page with results:
None
At the top
At the bottom
Autoformat
Off
Semi-auto
Full-auto
or
Get the URL with preset values ?
